TAP GRAS in Capsella grandiflora

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

GRAS

(Domain names are clickable)



List of proteins (32)

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namename additionClick button to show/hide sequence: Download sequence?
Cagra.0001s0019.1.ppacid=28894713 transcript=Cagra.0001s0019.1 locus=Cagra.0001s0019 ID=Cagra.0001s0019.1.v1.1 annot-version=v1.1
Cagra.0196s0006.1.ppacid=28915712 transcript=Cagra.0196s0006.1 locus=Cagra.0196s0006 ID=Cagra.0196s0006.1.v1.1 annot-version=v1.1
Cagra.0239s0069.1.ppacid=28915456 transcript=Cagra.0239s0069.1 locus=Cagra.0239s0069 ID=Cagra.0239s0069.1.v1.1 annot-version=v1.1
Cagra.0342s0029.1.ppacid=28909922 transcript=Cagra.0342s0029.1 locus=Cagra.0342s0029 ID=Cagra.0342s0029.1.v1.1 annot-version=v1.1
Cagra.0448s0009.1.ppacid=28906335 transcript=Cagra.0448s0009.1 locus=Cagra.0448s0009 ID=Cagra.0448s0009.1.v1.1 annot-version=v1.1
Cagra.0463s0002.1.ppacid=28915239 transcript=Cagra.0463s0002.1 locus=Cagra.0463s0002 ID=Cagra.0463s0002.1.v1.1 annot-version=v1.1
Cagra.0562s0013.1.ppacid=28910775 transcript=Cagra.0562s0013.1 locus=Cagra.0562s0013 ID=Cagra.0562s0013.1.v1.1 annot-version=v1.1
Cagra.0736s0042.1.ppacid=28899793 transcript=Cagra.0736s0042.1 locus=Cagra.0736s0042 ID=Cagra.0736s0042.1.v1.1 annot-version=v1.1
Cagra.0860s0005.1.ppacid=28901394 transcript=Cagra.0860s0005.1 locus=Cagra.0860s0005 ID=Cagra.0860s0005.1.v1.1 annot-version=v1.1
Cagra.1158s0007.1.ppacid=28916671 transcript=Cagra.1158s0007.1 locus=Cagra.1158s0007 ID=Cagra.1158s0007.1.v1.1 annot-version=v1.1
Cagra.1261s0006.1.ppacid=28895209 transcript=Cagra.1261s0006.1 locus=Cagra.1261s0006 ID=Cagra.1261s0006.1.v1.1 annot-version=v1.1
Cagra.1317s0069.1.ppacid=28910449 transcript=Cagra.1317s0069.1 locus=Cagra.1317s0069 ID=Cagra.1317s0069.1.v1.1 annot-version=v1.1
Cagra.13458s0001.1.ppacid=28920218 transcript=Cagra.13458s0001.1 locus=Cagra.13458s0001 ID=Cagra.13458s0001.1.v1.1 annot-version=v1.1
Cagra.1632s0036.1.ppacid=28919424 transcript=Cagra.1632s0036.1 locus=Cagra.1632s0036 ID=Cagra.1632s0036.1.v1.1 annot-version=v1.1
Cagra.1671s0372.1.ppacid=28914210 transcript=Cagra.1671s0372.1 locus=Cagra.1671s0372 ID=Cagra.1671s0372.1.v1.1 annot-version=v1.1
Cagra.1671s0373.1.ppacid=28914296 transcript=Cagra.1671s0373.1 locus=Cagra.1671s0373 ID=Cagra.1671s0373.1.v1.1 annot-version=v1.1
Cagra.18121s0006.1.ppacid=28914947 transcript=Cagra.18121s0006.1 locus=Cagra.18121s0006 ID=Cagra.18121s0006.1.v1.1 annot-version=v1.1
Cagra.2098s0043.1.ppacid=28919508 transcript=Cagra.2098s0043.1 locus=Cagra.2098s0043 ID=Cagra.2098s0043.1.v1.1 annot-version=v1.1
Cagra.2235s0013.1.ppacid=28907725 transcript=Cagra.2235s0013.1 locus=Cagra.2235s0013 ID=Cagra.2235s0013.1.v1.1 annot-version=v1.1
Cagra.25155s0006.1.ppacid=28912849 transcript=Cagra.25155s0006.1 locus=Cagra.25155s0006 ID=Cagra.25155s0006.1.v1.1 annot-version=v1.1
Cagra.2766s0005.1.ppacid=28917963 transcript=Cagra.2766s0005.1 locus=Cagra.2766s0005 ID=Cagra.2766s0005.1.v1.1 annot-version=v1.1
Cagra.3264s0006.1.ppacid=28912435 transcript=Cagra.3264s0006.1 locus=Cagra.3264s0006 ID=Cagra.3264s0006.1.v1.1 annot-version=v1.1
Cagra.3264s0007.1.ppacid=28912431 transcript=Cagra.3264s0007.1 locus=Cagra.3264s0007 ID=Cagra.3264s0007.1.v1.1 annot-version=v1.1
Cagra.3356s0014.1.ppacid=28898133 transcript=Cagra.3356s0014.1 locus=Cagra.3356s0014 ID=Cagra.3356s0014.1.v1.1 annot-version=v1.1
Cagra.3501s0003.1.ppacid=28902325 transcript=Cagra.3501s0003.1 locus=Cagra.3501s0003 ID=Cagra.3501s0003.1.v1.1 annot-version=v1.1
Cagra.4170s0002.1.ppacid=28913217 transcript=Cagra.4170s0002.1 locus=Cagra.4170s0002 ID=Cagra.4170s0002.1.v1.1 annot-version=v1.1
Cagra.5996s0001.1.ppacid=28905496 transcript=Cagra.5996s0001.1 locus=Cagra.5996s0001 ID=Cagra.5996s0001.1.v1.1 annot-version=v1.1
Cagra.6011s0009.1.ppacid=28895842 transcript=Cagra.6011s0009.1 locus=Cagra.6011s0009 ID=Cagra.6011s0009.1.v1.1 annot-version=v1.1
Cagra.6170s0019.1.ppacid=28906167 transcript=Cagra.6170s0019.1 locus=Cagra.6170s0019 ID=Cagra.6170s0019.1.v1.1 annot-version=v1.1
Cagra.6263s0002.1.ppacid=28907128 transcript=Cagra.6263s0002.1 locus=Cagra.6263s0002 ID=Cagra.6263s0002.1.v1.1 annot-version=v1.1
Cagra.7055s0004.1.ppacid=28902055 transcript=Cagra.7055s0004.1 locus=Cagra.7055s0004 ID=Cagra.7055s0004.1.v1.1 annot-version=v1.1
Cagra.9501s0015.1.ppacid=28894278 transcript=Cagra.9501s0015.1 locus=Cagra.9501s0015 ID=Cagra.9501s0015.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum